KAWAI, Gota: search on Z-Library

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1

Regional Polysterism in the GTP-Bound Form of the Human c-Ha-Ras Protein †,‡

Ito, Yutaka, Yamasaki, Kazuhiko, Iwahara, Junji, Terada, Tohru, Kamiya, Akihide, Shirouzu, Mikako, Muto, Yutaka, Kawai, Gota, Yokoyama, Shigeyuki, Laue, Ernest D., Wälchli, Markus, Shibata, Takehiko,

Journal:

Year:

1997

Language:

english

File:

PDF, 399 KB

english, 1997

2

Conformational Rigidity of N 4 -Acetyl-2′-O-methylcytidine Found in tRNA of Extremely Thermophilic Archaebacteria (Archaea)

Kawai, Gota, Hashizume, Takeshi, Yasuda, Masayuki, Miyazawa, Tatsuo, McCloskey, James A., Yokoyama, Shigeyuki

Journal:

Nucleosides and Nucleotides

Year:

1992

Language:

english

File:

PDF, 592 KB

english, 1992

3

Microtubule-associated protein (MAP) 4 interacts with microtubules in an intrinsically disordered manner

Hashi, Yurika, Kawai, Gota, Kotani, Susumu

Journal:

Bioscience Biotechnology and Biochemistry

Year:

2014

Language:

english

File:

PDF, 439 KB

english, 2014

4

Prediction of RNA Pseudoknots Using Heuristic Modeling with Mapping and Sequential Folding

Dawson, Wayne K., Fujiwara, Kazuya, Kawai, Gota, Egli, Martin

Journal:

Year:

2007

Language:

english

File:

PDF, 570 KB

english, 2007

5

Cytotoxic Mechanism of Excess Polyamines Functions through Translational Repression of Specific Proteins Encoded by Polyamine Modulon

Sakamoto, Akihiko, Sahara, Junpei, Kawai, Gota, Yamamoto, Kaneyoshi, Ishihama, Akira, Uemura, Takeshi, Igarashi, Kazuei, Kashiwagi, Keiko, Terui, Yusuke

Journal:

International Journal of Molecular Sciences

Year:

2020

File:

PDF, 2.07 MB

2020

6

A new entropy model for RNA: part II. Persistence-related entropic contributions to RNA secondary structure free energy calculations

Dawson, Wayne, Yamamoto, Kenji, Shimizu, Kentaro, Kawai, Gota

Journal:

Journal of Nucleic Acids Investigation

Year:

2013

File:

PDF, 1.44 MB

2013

7

Conformational rigidity of specific pyrimidine residues in tRNA arises from posttranscriptional modifications that enhance steric interaction between the base and the 2'-hydroxyl group

Kawai, Gota, Yamamoto, Yuriko, Kamimura, Takashi, Masegi, Tsukio, Sekine, Mitsuo, Hata, Tsujiaki, Iimori, Takamasa, Watanabe, Tatsuo, Miyazawa, Tatsuo, Yokoyama, Shigeyuki

Journal:

Year:

1992

Language:

english

File:

PDF, 798 KB

english, 1992

8

NMR Analyses of Structures and Functions of Modified Nucleosides in Transfer Ribonucleic Acids

Yokoyama, Shigeyuki, Muramatsu, Tomonari, Kawai, Gota, Miyazawa, Tatsuo

Journal:

Nucleosides and Nucleotides

Year:

1990

Language:

english

File:

PDF, 485 KB

english, 1990

9

A new entropy model for RNA: part IV, The Minimum Free Energy (mFE) and the thermodynamically most-probable folding pathway (TMPFP)

Dawson, Wayne, Kawai, Gota

Journal:

Journal of Nucleic Acids Investigation

Year:

2015

File:

PDF, 777 KB

2015

10

1H,13C and15N Resonance Assignments of the 2′-5′ RNA Ligase-like Protein fromPyrococcus furiosus

Kiyoshi Okada, Takashi Matsuda, Taiichi Sakamoto, Yutaka Muto, Shigeyuki Yokoyama, Akio Kanai, Gota Kawai

Journal:

Journal of Biomolecular NMR

Year:

2006

Language:

english

File:

PDF, 167 KB

english, 2006

11

Analysis of Local Convergence in NMR Structure Calculation for RNA by a Classification System for Nucleic Acid Structure (CSNA)

Someya, Tatsuhiko, Sakamoto, Taiichi, Takasu, Akitsugu, Kawai, Gota

Journal:

Nucleosides Nucleotides & Nucleic Acids

Year:

2004

Language:

english

File:

PDF, 405 KB

english, 2004

12

Structural and functional effect of Trp-62→Gly and Asp-101→Gly substitutions on substrate-binding modes of mutant hen egg-white lysozymes

MAENAKA, Katsumi, MATSUSHIMA, Masaaki, KAWAI, Gota, KIDERA, Akinori, WATANABE, Kimitsuna, KUROKI, Ryota, KUMAGAI, Izumi

Journal:

Biochemical Journal

Year:

1998

Language:

english

File:

PDF, 1.65 MB

english, 1998

13

2D1624 Structural analysis of MAP4 Microtubule-Binding domein fragment using NMR(Protein: Structure & Function 1,The 48th Annual Meeting of the Biophysical Society of Japan)

Hashi, Yurika, Koganei, Takafumi, Matsushima, Kazuyuki, Kawai, Gota, Kotani, Susumu

Journal:

Seibutsu Butsuri

Year:

2011

Language:

english

File:

PDF, 230 KB

english, 2011

14

Crystal structure of the flavin-dependent thymidylate synthase Thy1 from Thermus thermophilus with an extra C-terminal domain

Ogawa, Aoba, Sampei, Gen-ichi, Kawai, Gota

Journal:

Acta Crystallographica Section F Structural Biology Communications

Year:

2019

File:

PDF, 1.20 MB

2019

15

A new entropy model for RNA: part V, Incorporating the Flory-Huggins model in structure prediction and folding

Dawson, Wayne, Kawai, Gota

Journal:

Journal of Nucleic Acids Investigation

Year:

2015

File:

PDF, 944 KB

2015

16

Interaction mechanism between microtubule-associated proteins and microtubules. A proton nuclear magnetic resonance analysis on the binding of synthetic peptide to tubulin

Kotani, Susumu, Kawai, Gota, Yokoyama, Shigeyuki, Murofushi, Hiromu

Journal:

Year:

1990

Language:

english

File:

PDF, 690 KB

english, 1990

17

Fabrication and BSA Adsorption/Desorption Properties of Titania/Silica Composite Films Modified with Silane Coupling Agents

Shibata, Hirobumi, Shinozaki, Ryota, Ogura, Taku, Sakai, Hideki, Abe, Masahiko, Kawai, Gota, Hashimoto, Kazuaki

Journal:

Journal of Oleo Science

Year:

2014

Language:

english

File:

PDF, 963 KB

english, 2014

18

Conformatzonal Properties of a Novel Modified Nucleoside, 5-Formylcytidine, Found at the First Position of the Anticodon of Bovine Mitochondrial tRNA Met

Kawai, Gota, Yokogawa, Takashi, Nishikawa, Kazuya, Ueda, Takuya, Hashizume, Takeshi, McCloskey, James A., Yokoyama, Shigeyuki, Watanabe, Kimitsuna

Journal:

Nucleosides and Nucleotides

Year:

1994

Language:

english

File:

PDF, 441 KB

english, 1994

19

Spin-labeling proton NMR study on aromatic amino acid residues in the guanine nucleotide binding site of human c-Ha-ras(1-171) protein

Hata-Tanaka, Akiko, Kawai, Gota, Yamasaki, Kazuhiko, Ito, Yutaka, Kajiura, Hiroko, Ha, Jong Myung, Miyazawa, Tatsuo, Yokoyama, Shigeyuki, Nishimura, Susumu

Journal:

Year:

1989

Language:

english

File:

PDF, 855 KB

english, 1989

20

A modified uridine in the first position of the anticodon of a minor species of arginine tRNA, the argU gene product, from Escherichia coli

Kensaku SAKAMOTO, Gota KAWAI, Tatsuya NIIMI, Takahiko SATOH, Mitsuo SEKINE, Ziro YAMAIZUMI, Susumu NISHIMURA, Tatsuo MIYAZAWA, Shigeyuki YOKOYAMA

Journal:

Year:

1993

Language:

english

File:

PDF, 790 KB

english, 1993

21

Solution structure of S-DNA formed by covalent base pairing involving a disulfide bond

Hatano, Akihiko, Okada, Munehiro, Kawai, Gota

Journal:

Organic & Biomolecular Chemistry

Year:

2012

Language:

english

File:

PDF, 1.88 MB

english, 2012

22

Impact of 5′-end nucleotide modifications of HIV-1 genomic RNA on reverse transcription

Huang, Yu-Lun, Kawai, Gota, Hasegawa, Atsuhiko, Kannagi, Mari, Masuda, Takao

Journal:

Biochemical and Biophysical Research Communications

Year:

2019

Language:

english

File:

PDF, 1.28 MB

english, 2019

23

Parallel motif triplex formation via a new, bi-directional hydrogen bonding pattern incorporating a synthetic cyanuryl nucleoside into the sense chain

Hatano, Akihiko, Shimazaki, Kei, Otsu, Maina, Kawai, Gota

Journal:

Year:

2020

File:

PDF, 1.13 MB

2020

24

The stem hairpin loop structure of p2Sp1 RNA is required for RNA-cleaving activity

Kazumi Hosono, Hideo Hosaka, Gota Kawai, Kazuyuki Takai, Hiroshi Takaku

Journal:

Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression

Year:

1999

Language:

english

File:

PDF, 320 KB

english, 1999

25

Higher-order structure and thermal instability of bovine mitochondrial tRNASerUGA investigated by proton NMR spectroscopy

Ikuko Hayashi, Gota Kawai, Kimitsuna Watanabe

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 866 KB

english, 1998

26

Biosynthesis of a Protein Containing a Nonprotein Amino Acid by Escherichia coli: L-2-aminohexanoic Acid at Position 21 in Human Epidermal Growth Factor

Hiroshi Koide, Shigeyuki Yokoyama, Gota Kawai, Jong-Myung Ha, Takanori Oka, Shintaro Kawai, Tetsuo Miyake, Toru Fuwa and Tatsuo Miyazawa

Journal:

Proceedings of the National Academy of Sciences

Year:

1988

Language:

english

File:

PDF, 1.05 MB

english, 1988

27

Sequence and structure analysis of a mirror tRNA located upstream of the cytochrome oxidase I mRNA in mouse mitochondria

Okui, Saya, Ushida, Chisato, Kiyosawa, Hidenori, Kawai, Gota

Journal:

Journal of Biochemistry

Year:

2015

Language:

english

File:

PDF, 1024 KB

english, 2015

28

Kinetic and thermodynamic analyses of interaction between a high-affinity RNA aptamer and its target protein

Amano, Ryo, Takada, Kenta, Tanaka, Yoichiro, Nakamura, Yoshikazu, Kawai, Gota, Kozu, Tomoko, Sakamoto, Taiichi

Journal:

Year:

2016

Language:

english

File:

PDF, 1.01 MB

english, 2016

29

Paramagnetic Inversion of the Sign of the Interference Contribution to the Transverse Relaxation of the Imido Protons of the Coordinated Imidazoles in the Uniformly15N-Labeled Cytochromec3

Tomoaki Ohmura, Erisa Harada, Toshimichi Fujiwara, Gota Kawai, Kimitsuna Watanabe, Hideo Akutsu

Journal:

Journal of Magnetic Resonance

Year:

1998

Language:

english

File:

PDF, 145 KB

english, 1998

30

Structural analysis of mutant hen egg-white lysozyme preferring a minor binding mode

Katsumi Maenaka, Masaaki Matsushima, Gota Kawai, Kimitsuna Watanabe, Ryota Kuroki, Izumi Kumagai

Journal:

Biochimica et Biophysica Acta (BBA) - Protein Structure and Molecular Enzymology

Year:

1998

Language:

english

File:

PDF, 508 KB

english, 1998

31

Selective structural change of bulged-out region of double-stranded RNA containing bulged nucleotides by spermidine

Kyohei Higashi, Yusuke Terui, Emire Inomata, Daisuke Katagiri, Yusuke Nomura, Tatsuhiko Someya, Kazuhiro Nishimura, Keiko Kashiwagi, Gota Kawai, Kazuei Igarashi

Journal:

Biochemical and Biophysical Research Communications

Year:

2008

Language:

english

File:

PDF, 1.22 MB

english, 2008

32

In NMR Tube Transcription for Rapid Screening of RNA Conformation

Okui, Saya, Kawai, Gota

Journal:

Nucleosides Nucleotides & Nucleic Acids

Year:

2015

Language:

english

File:

PDF, 745 KB

english, 2015

33

Self-cleavage of p2Sp1 RNA with Mg2+ and non-ionic detergent (Brij 58)

Hideo Hosaka, Kazumi Hosono, Gota Kawai, Kazuyuki Takai, Hiroshi Takaku

Journal:

Journal of Inorganic Biochemistry

Year:

2000

Language:

english

File:

PDF, 337 KB

english, 2000

34

RNomics of Thermus themophilus HB8 by DNA microarray and next-generation sequencing

Kawai, Gota, Aoki, Yuri, Otsu, Maina, Koike, Naomi, Sampei, Gen-ichi

Journal:

Journal of Biochemistry

Year:

2017

Language:

english

File:

PDF, 665 KB

english, 2017

35

Covalent Incorporation of Methyl Red Dyes into Double-Stranded DNA for Their Ordered Clustering

Hiromu Kashida, Masayuki Tanaka, Seiki Baba, Taiichi Sakamoto, Gota Kawai, Hiroyuki Asanuma, Makoto Komiyama

Journal:

Chemistry - A European Journal

Year:

2006

Language:

english

File:

PDF, 411 KB

english, 2006

36

A new entropy model for RNA: part III. Is the folding free energy landscape of RNA funnel shaped?

Dawson, Wayne, Takai, Toshikuni, Ito, Nobuharu, Shimizu, Kentaro, Kawai, Gota

Journal:

Journal of Nucleic Acids Investigation

Year:

2014

Language:

english

File:

PDF, 130.56 MB

english, 2014

37

Fate of HIV-1 cDNA intermediates during reverse transcription is dictated by transcription initiation site of virus genomic RNA

Masuda, Takao, Sato, Yoko, Huang, Yu-Lun, Koi, Satoshi, Takahata, Tatsuro, Hasegawa, Atsuhiko, Kawai, Gota, Kannagi, Mari

Journal:

Scientific Reports

Year:

2016

Language:

english

File:

PDF, 1.65 MB

english, 2016

38

Polyamine Stimulation of the Synthesis of Oligopeptide-binding Protein (OppA)

Yoshida, Madoka, Meksuriyen, Duangdeun, Kashiwagi, Keiko, Kawai, Gota, Igarashi, Kazuei

Journal:

Journal of Biological Chemistry

Year:

1999

Language:

english

File:

PDF, 449 KB

english, 1999

39

Structural requirement for the two-step dimerization of human immunodeficiency virus type 1 genome

TAKAHASHI, KEN-ICHI, BABA, SEIKI, CHATTOPADHYAY, PRATIMA, KOYANAGI, YOSHIO, YAMAMOTO, NAOKI, TAKAKU, HIROSHI, KAWAI, GOTA

Journal:

Year:

2000

Language:

english

File:

PDF, 409 KB

english, 2000

40

Immobilization of DNA on Quartz Crystal Microbalance Sensor Modified with Self-Assembled Monolayer of Thiol Derivative

Shibata, Hirobumi, Nemoto, Junpei, Shiba, Shota, Yamane, Yusuke, Kawai, Gota, Hashimoto, Kazuaki

Journal:

Journal of Oleo Science

Year:

2020

Language:

english

File:

PDF, 280 KB

english, 2020

41

Conformation change of effector-region residues in antiparallel β-sheet of human c-Ha-ras protein on GDP→GTPγS exchange: A two-dimensional NMR study

Kazuhiko Yamasaki, Gota Kawai, Yutaka Ito, Yutaka Muto, Junko Fujita, Tatsuo Miyazawa, Susumu Nishimura, Shigeyuki Yokoyama

Journal:

Biochemical and Biophysical Research Communications

Year:

1989

Language:

english

File:

PDF, 544 KB

english, 1989

42

NMR analyses of the conformations of L-isoleucine and L-valine bound to Escherichia coli isoleucyl-tRNA synthetase

Kohda, Daisuke, Kawai, Gota, Yokoyama, Shigeyuki, Kawakami, Makoto, Mizushima, Shoji, Miyazawa, Tatsuo

Journal:

Year:

1987

Language:

english

File:

PDF, 1016 KB

english, 1987

43

Distinct RNA recognition mechanisms in closely related LINEs from zebrafish

Otsu, Maina, Kawai, Gota

Journal:

Nucleosides Nucleotides & Nucleic Acids

Year:

2019

File:

PDF, 1.48 MB

2019

44

A new entropy model for RNA: part II. Persistence-related entropic contributions to RNA secondary structure free energy calculations

Dawson, Wayne, Yamamoto, Kenji, Shimizu, Kentaro, Kawai, Gota

Journal:

Journal of Nucleic Acids Investigation

Year:

2013

Language:

english

File:

PDF, 889 KB

english, 2013

45

Structural insights into the catalytic reaction trigger and inhibition of D -3-hydroxybutyrate dehydrogenase

Kanazawa, Hiroki, Hoque, Md. Mominul, Tsunoda, Masaru, Suzuki, Kaoru, Yamamoto, Tamotsu, Kawai, Gota, Kondo, Jiro, Takénaka, Akio

Journal:

Acta Crystallographica Section F Structural Biology Communications

Year:

2016

Language:

english

File:

PDF, 2.40 MB

english, 2016

46

Solution structure of an RNA fragment with the P7/P9.0 region and the 3???-terminal guanosine of the Tetrahymena group I intron

KITAMURA, AYA, MUTO, YUTAKA, WATANABE, SATORU, KIM, INSIL, ITO, TAKUHIRO, NISHIYA, YOICHI, SAKAMOTO, KENSAKU, OHTSUKI, TAKASHI, KAWAI, GOTA, WATANABE, KIMITSUNA, HOSONO, KAZUMI, TAKAKU, HIROSHI, KATOH

Journal:

Year:

2002

Language:

english

File:

PDF, 19.87 MB

english, 2002

47

Polyamines stimulate the CHSY1 synthesis through the unfolding of the RNA G-quadruplex at the 5'-untraslated region

Yamaguchi, Katsutoshi, Asakura, Kiryu, Imamura, Masataka, Kawai, Gota, Sakamoto, Taiichi, Furihata, Tomomi, Linhardt, Robert J, Igarashi, Kazuei, Toida, Toshihiko, Higashi, Kyohei

Journal:

Biochemical Journal

Year:

2018

Language:

english

File:

PDF, 5.83 MB

english, 2018

48

GNA Trinucleotide Loop Sequences Producing Extraordinarily Stable DNA Minihairpins †

Yoshizawa, Satoko, Kawai, Gota, Watanabe, Kimitsuna, Miura, Kin-ichiro, Hirao, Ichiro

Journal:

Year:

1997

Language:

english

File:

PDF, 218 KB

english, 1997

49

Polyamines Enhance Synthesis of the RNA Polymerase ς 38 Subunit by Suppression of an Amber Termination Codon in the Open Reading Frame

Yoshida, Madoka, Kashiwagi, Keiko, Kawai, Gota, Ishihama, Akira, Igarashi, Kazuei

Journal:

Journal of Biological Chemistry

Year:

2002

File:

PDF, 550 KB

2002

50

Site-directed mutagenesis, fluorescence, and two-dimensional NMR studies on microenvironments of effector region aromatic residues of human c-Ha-Ras protein

Yamasaki, Kazuhiko, Shirouzu, Mikako, Muto, Yutaka, Fujita-Yoshigaki, Junko, Koide, Hiroshi, Ito, Yutaka, Kawai, Gota, Hattori, Seisuke, Yokoyama, Shigeyuki

Journal:

Year:

1994

Language:

english

File:

PDF, 1.13 MB

english, 1994

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